Marks Lab News

 
 

Sarah Wins Best Poster at MoML

November, 2023

Conference Information here: https://www.moml.mit.edu/


Welcome post docs Evan & pascal!


july, 2023

Summer students sunny and Annie visit the lab and give two great talks! Good job!!!


may, 2023

DEBBIE MARKS GETS TENURE!

Roses are red
Violets are blue
Debbie got tenure
We’re so happy for you!

may, 2023

Alan graduates!!! Congrats - enjoy new york city!!


June, 2022

Sarah WINS the Takeda Fellowship!


June, 2022

Han wINs the Fujifilm Fellowship!


June, 2022

Courtney Shearer joins lab!


April, 2022

Alan wInS the Canadian NSERC fellowship!


April, 2022

Eli WEINSTEIN Graduates!

Congratulations Dr. Weinstein on your successful defense of “Generative Statistical Methods for Biological Sequences” - we hope your post doc at Columbia is extremely fulfilling!


Steff and Han both pass their Qualifying exams !!! February 2022


DAVID DING GRADUATES! JANUARY 4, 2022

Headshot of David Ding

David Ding (a joint student between Debbie Marks at Harvard Medical School and Michael Laub at MIT) successfully defended his thesis, “Evolution of interacting proteins through non-specific and non-contacting mutations”. Congratulations Dr. Ding!


JUNE SHIN GRADUATES!

December 20, 2021

Screencap of a Zoom call, with 18 blocks showing individual faces and a video of June presenting in the top left corner block.

Jung-Eun (June) Shin successfully defends her thesis, “Development and validation of computational models for efficient design of biological sequences”. Congratulations Dr. Shin!


june 2021

Hansen Spinner and steffanie paul join the marks lab!

Han has a background in protein engineering and Steff has a background in computational biology. Welcome!


September 28th, 2020

Nathan Rollins Graduates!

Nathan Rollins successfully defended his thesis, “Protein structure and design by genetic experiments” Congratulations, Dr. Rollins!


july, 2020

NDCN annual meeting posters

Members of the Marks lab are presenting virtual posters at the CZI Neurodegeneration Challenge Network (NDCN) Annual Meeting this month! View posters at https://linktr.ee/markslabNDCN


Alan Amin and Rose Orenbuch join the marks lab!

May, 2020

Both are students entering their second year of PhD programs in the Systems Biology. Alan with a background in mathematics and biochemistry. And Rose in computer science and biology.


April 19th, 2019

Anna Green Graduates!

Anna_Graduation.jpg

Anna Green successfully defended her thesis, “Molecular phenotypes from evolutionary sequences: Method development and biological applications” Congratulations, Dr. Green!


Adam Riesselman Graudates!

December 12th, 2018

adamsdefense2.jpeg

Adam Riesselman successfully defended his thesis, "Building maps from genetic sequences to biological function." Congratulations, Dr. Riesselman!

 


Debora Marks Awarded CZI Ben Barres Early Career Investigation Award

December 12th, 2018

Debora Marks was recently awarded a 2.5 million grant from the Chan Zuckerberg Initiative to pursue novel neurobiology research. The specific award honors Prof. Ben Barres, an exemplary neurobiologist and a champion for equal opportunities in science. This grant seeks to build a network of early-career scientists who can develop new strategies for the prevention and treatment of neurodegenerative disease. This multi-year grant will enable new positions in the Marks lab; apply here!

Chan-Zuckerberg Initiative Press Release
HMS Press Release


John Ingraham Successfully Defends his thesis

August 2nd, 2018

John Ingraham became the first Marks Lab graduate student to defend his thesis, "Probabilistic Models of Structure in Biological Sequences."
Congratulations Dr. Ingraham!


Talk by John Ingraham at Models, Inference, and Algorithms meeting at the Broad

April 17th, 2018

Check out the talk John gave on learning protein structure using a differentiable simulator at the Broad Institute on April 11, 2018! (link)
You can also check out a talk by Debora Marks at this meeting series from February 2017 here!


Mutation Effects predicted from sequence co-variation paper

January 16th, 2017

Paper by Thomas, John, Frank, Charlotta, Mike Springer, Chris, and Debbie on EVmutations and how they can be used to predict the effects of mutations came out in Nature online!


Disorder Page and Paper

September 22nd, 2016

Order_in_Disorder.jpg

Paper by Agnes, Perry, John, Thomas, Bonnie, Chris, and Debbie on alternative conformations in human disordered proteins just came out in Cell!

Disorder Database